#include "G4HumanPhantomColour.h"
#include "G4HumanPhantomMaterial.h"
#include "G4MIRDUpperLargeIntestine.h"

#include "G4EllipticalTube.hh"
#include "G4LogicalVolume.hh"
#include "G4PVPlacement.hh"
#include "G4RotationMatrix.hh"
#include "G4SDManager.hh"
#include "G4SystemOfUnits.hh"
#include "G4ThreeVector.hh"
#include "G4UnionSolid.hh"
#include "G4VPhysicalVolume.hh"
#include "G4VisAttributes.hh"
#include "globals.hh"

G4MIRDUpperLargeIntestine::G4MIRDUpperLargeIntestine() {}

G4MIRDUpperLargeIntestine::~G4MIRDUpperLargeIntestine() {}

G4VPhysicalVolume* G4MIRDUpperLargeIntestine::Construct(const G4String& volumeName, G4VPhysicalVolume* mother,
                                                        const G4String& colourName, G4bool wireFrame, G4bool) {
    G4cout << "Construct " << volumeName << " with mother volume " << mother->GetName() << G4endl;

    G4HumanPhantomMaterial* material = new G4HumanPhantomMaterial();
    G4Material* soft = material->GetMaterial("soft_tissue");
    delete material;

    G4double dx = 2.5 * cm;    // aU
    G4double dy = 2.5 * cm;    // bU
    G4double dz = 4.775 * cm;  // dzU

    G4VSolid* AscendingColonUpperLargeIntestine = new G4EllipticalTube("AscendingColon", dx, dy, dz);

    dx = 2.5 * cm;   // bt
    dy = 1.5 * cm;   // ct
    dz = 10.5 * cm;  // x1t

    G4VSolid* TraverseColonUpperLargeIntestine = new G4EllipticalTube("TraverseColon", dx, dy, dz);

    G4RotationMatrix* relative_rm = new G4RotationMatrix();
    relative_rm->rotateX(90. * degree);
    relative_rm->rotateZ(0. * degree);
    relative_rm->rotateY(90. * degree);
    G4UnionSolid* upperLargeIntestine =
        new G4UnionSolid("UpperLargeIntestine", AscendingColonUpperLargeIntestine, TraverseColonUpperLargeIntestine,
                         relative_rm, G4ThreeVector(8.0 * cm, 0.0, 6.275 * cm));  //,0,dzU + ct transverse

    G4LogicalVolume* logicUpperLargeIntestine =
        new G4LogicalVolume(upperLargeIntestine, soft, "logical" + volumeName, 0, 0, 0);

    G4VPhysicalVolume* physUpperLargeIntestine =
        new G4PVPlacement(0, G4ThreeVector(-8.0 * cm, -2.36 * cm, -15.775 * cm),
                          "physicalUpperLargeIntestine",  // xo, yo, zo ascending colon
                          logicUpperLargeIntestine, mother, false, 0, true);

    // Visualization Attributes
    //  G4VisAttributes* UpperLargeIntestineVisAtt = new G4VisAttributes(G4Colour(1.0,1.0,0.0));
    G4HumanPhantomColour* colourPointer = new G4HumanPhantomColour();
    G4Colour colour = colourPointer->GetColour(colourName);
    G4VisAttributes* UpperLargeIntestineVisAtt = new G4VisAttributes(colour);
    UpperLargeIntestineVisAtt->SetForceSolid(wireFrame);
    logicUpperLargeIntestine->SetVisAttributes(UpperLargeIntestineVisAtt);

    G4cout << "UpperLargeIntestine created !!!!!!" << G4endl;

    // Testing UpperLargeIntestine Volume
    G4double UpperLargeIntestineVol = logicUpperLargeIntestine->GetSolid()->GetCubicVolume();
    G4cout << "Volume of UpperLargeIntestine = " << UpperLargeIntestineVol / cm3 << " cm^3" << G4endl;

    // Testing UpperLargeIntestine Material
    G4String UpperLargeIntestineMat = logicUpperLargeIntestine->GetMaterial()->GetName();
    G4cout << "Material of UpperLargeIntestine = " << UpperLargeIntestineMat << G4endl;

    // Testing Density
    G4double UpperLargeIntestineDensity = logicUpperLargeIntestine->GetMaterial()->GetDensity();
    G4cout << "Density of Material = " << UpperLargeIntestineDensity * cm3 / g << " g/cm^3" << G4endl;

    // Testing Mass
    G4double UpperLargeIntestineMass = (UpperLargeIntestineVol)*UpperLargeIntestineDensity;
    G4cout << "Mass of UpperLargeIntestine = " << UpperLargeIntestineMass / gram << " g" << G4endl;

    return physUpperLargeIntestine;
}